PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_31817-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 358aa    MW: 38040 Da    PI: 4.5167
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_31817-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12e-052532733555
                      TS-STCHHHHHHHHHHHHHHH CS
              HLH  35 skKlsKaeiLekAveYIksLq 55 
                      s++ +Ka++L +A+eY+ksLq
  TRIUR3_31817-P1 253 SERTDKASMLDEAIEYLKSLQ 273
                      7899****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.06E-7247286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-5251279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.90E-5253277No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MADHTAAMIE GGQQGDPAES WKTNGEDDGL VELLWCSGHV VMQSQAPPRP AVPEQEAAPW  60
FQYPVVDEDD YSVERDLFSE IFGGMPADGA GRPCKEEDKE RGAADAVTAL RSGVMPPPLL  120
TDKAGLHGDG PRDSPASEAG ESSVVTMGSR RVCGGSNQAQ TPHVSDTADD DSVLLPRSGR  180
EARDARSYHS ASATLTTSST WSRPSGASKR KQSEGPSEAM QDVESDSADV TCETAQKPTT  240
AKRRRAAQVH NLSERTDKAS MLDEAIEYLK SLQLQLQVMW AMGGRMTLAP APVMFPAGAH  300
HSSVSSPSGS MAPTIIDSDA VQGETFLPGQ IFVFGGFALL ANSLGHLEQI ESYAPGRQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3609631e-156AK360963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1129K08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004963135.13e-60PREDICTED: transcription factor PIF4-like isoform X1
RefseqXP_004963136.13e-60PREDICTED: transcription factor PIF4-like isoform X1
RefseqXP_012699734.13e-60PREDICTED: transcription factor PIF4-like isoform X2
TrEMBLT1NM640.0T1NM64_TRIUA; Uncharacterized protein
STRINGMLOC_71592.21e-138(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31073677
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.12e-15phytochrome interacting factor 3-like 6